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Анализ сайта
Title
BEAST Software - Bayesian Evolutionary Analysis Sampling Trees | BEAST Documentation
Keywords
home, beast mcmc documentation tutorial
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<H1>
<H2>
- What is BEAST?
- Getting started with BEAST
<H3>
- Downloading BEAST
- Introductory Tutorials
- Citing BEAST
- BEAST-Users mailing list
Анализ текста
- 4.83% ( 25 ) beast
- 3.47% ( 18 ) tutorial
- 2.51% ( 13 ) model
- 1.74% ( 9 ) using
- 1.54% ( 8 ) tree
- 0.97% ( 5 ) analysing
- 0.97% ( 5 ) molecular
- 0.97% ( 5 ) phylodynamic
- 0.97% ( 5 ) program
- 0.97% ( 5 ) space
- 0.77% ( 4 ) analysis
- 0.77% ( 4 ) bayesian
- 0.77% ( 4 ) clock
- 0.77% ( 4 ) continuous
- 0.77% ( 4 ) data
- 0.77% ( 4 ) estimating
- 0.77% ( 4 ) mcmc
- 0.77% ( 4 ) phylogenies
- 0.77% ( 4 ) rate
- 0.77% ( 4 ) selection
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| Внешние ссылки главной страницы ( 5 ) | |
| github.com/beast-dev/beast-mcmc | Source Code |
| beast2.org | please look here |
| doi.org/10.1093/ve/vey016 | DOI:10.1093/ve/vey016 |
| groups.google.com/group/beast-users | http://groups.google.com/group/beast-users |
| github.com/tomjohnson1492/documentation-theme-jekyll/ | Documentation Theme for Jekyll |
| Внутренние ссылки главной страницы ( 71 ) | |
| index.html | |
| # | Help |
| topics.html | Topics |
| faq.html | FAQ |
| tag_help.html | Help |
| news | News |
| about | What can BEAST do? |
| installing | Installing |
| /getting_started | an introduction to using BEAST we provide some basic introductory tutorials |
| programs | BEAUti, BEAST and other programs |
| beagle | BEAGLE Library |
| tracer | Tracer |
| figtree | FigTree |
| tempest | TempEst |
| spread4 | SPREAD4 |
| spreadgl | spread.gl |
| pibuss | PiBUSS |
| beastgen | BEASTGen |
| first_tutorial | First Tutorial |
| second_tutorial | Second Tutorial |
| rates_and_dates | Rates and Dates |
| tempest_tutorial | Temporal Signal using TempEst |
| bets_tutorial | Bayesian Evaluation of Temporal Signal |
| online_inference | Online phylodynamic inference |
| phylodynamics_of_epidemic_influenza | Phylodynamics of an epidemic |
| phylodynamics_of_seasonal_influenza | Phylodynamics of seasonal influenza |
| continuous_traits | Analysing Continuous Traits |
| continuous_traits_no_sequence | Analysing Continuous Traits without Sequence Data |
| constructing_models | Constructing a model in BEAUti |
| taxon_sets | Creating taxon sets |
| fixed_local_clocks | Creating fixed local clocks |
| empirical_trees | Using an empirical tree distribution |
| tip_dates | Specify sampling dates |
| tip_date_sampling | Tip date sampling |
| analysing_beast_output | Analysing BEAST output |
| tracer_convergence | Convergence diagnostics in Tracer |
| custom_substitution_models | Create custom substitution models |
| markov_modulated | Create Markov-modulated models |
| hierarchical_models | Hierarchical Phylogenetic Model Tutorial |
| markov_jumps_rewards | Markov Jumps and Rewards Tutorial |
| adjusted_bayes_factor | Adjusted Bayes Factor Tutorial |
| adaptive_mcmc | Adaptive MCMC Tutorial |
| model_selection_1 | Model Selection Tutorial |
| model_selection_2 | Model Selection Advanced Tutorial |
| model_selection_examples | Model Selection Examples |
| model_averaging_clocks | Clock Model Averaging Tutorial |
| epoch_models | Epoch Model Tutorial |
| time_dependent_rate_model | Time-Dependent Rate Model Tutorial |
| travel_history | Phylogeography with individual travel history |
| thorney_beast | Analysing datasets with tens of thousands of taxa |
| workshop_rates_and_dates | Estimating Rates and Dates |
| workshop_influenza_phylodynamics | Evolutionary Dynamics of Influenza |
| workshop_respiratory_virus_phylodynamics | Phylodynamics inference of respiratory viruses |
| workshop_model_selection | Model Selection and Testing |
| workshop_discrete_diffusion | Phylogeographic Diffusion in Discrete Space |
| workshop_continuous_diffusion_yfv | Phylogeographic Diffusion in Continuous Space, YFV |
| workshop_continuous_diffusion_wnv | Phylogeographic Diffusion in Continuous Space, WNV |
| workshop_genomic_epidemiology | Genomic epidemiology |
| workshop_figtree | Visualizing phylogenetic trees using FigTree |
| ess_tutorial | Effective Sample Size |
| performance | Optimizing Performance |
| clocks | Molecular Clocks |
| tree_priors | Tree Priors |
| parameter_priors | Parameter Priors |
| summarizing_trees | Summarizing trees |
| xml_reference | XML Reference |
| errors.html | Error Messages |
| glossary.html | Glossary |
| install_on_mac | Install BEAST on Mac |
| install_on_windows | Install BEAST on Windows |
| install_on_unix | Install BEAST on UNIX/Linux or Mac command-line |
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