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ETE Toolkit - Analysis and Visualization of (phylogenetic) trees
ETE,toolkit,ete2,tree,visualization,newick,orthology,paralogy,phylogenetics,phylogeny,phylogenomics,python
The ETE toolkits is Python library that assists in the analysis, manipulation and visualization of (phylogenetic) trees.
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---|---|---|---|
Google Analytics | Нет доступа | Нет доступа | n/a |
Данные linkpad ( 18 Мая 2016 ) | |
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Внешние ссылки главной страницы ( 3 ) | |
github.com/etetoolkit/ete | Contribute |
twitter.com/etetoolkit | Tweets by @etetoolkit |
mbe.oxfordjournals.org/content/early/2016/03/21/molbev.msw04... | doi: 10.1093/molbev/msw046 |
Внутренние ссылки главной страницы ( 22 ) | |
# | ETE is free software (GPL) |
/gallery/ | Tree annotation Custom node attributes can be rendered as graphical elements. Choose among external images, ... |
/docs/latest/index.html | Python API |
/docs/latest/tutorial/index.html | Python API Tutorial |
/docs/latest/reference/index.html | Python API Reference |
/documentation/tools/ | Tools overview |
/cookbook | Phylogenomic Tools Cookbook |
/treeview/ | TreeView |
/support/ | Support |
/about/ | About |
/download/ | Download |
/cookbook/ | Cookbook |
/docs/latest/tutorial/tutorial_trees.html | Trees as Python objects Load, create, traverse, search, prune, or modify hierarchical tree structures with eas... |
/docs/latest/tutorial/tutorial_drawing.html | Programmatic tree visualization Get full control of your tree images. Browse them interatively or render SVG, ... |
/ipython_notebook/ | Jupyter notebook support Prototype your methods using the Jupyter notebook framework including inline visualization of trees. |
/documentation/ete-build/ | Automated reconstruction of gene and species trees. Run phylogenetic workflows with ease. |
/documentation/ete-evol/ | Test evolutionary hypotheses You can run CodeML and SLR easly using ETE, as well as visualizing results. |
/documentation/ete-ncbiquery/ | Annotate trees with taxonomic data. Use the NCBI taxonomy database to perform queries efficiently or to annotate your trees. |
/documentation/ete-view/ | Visualize trees and sequence alignments Choose among detailed view, block-based, domain-based or condensed alignment formats. |
/documentation/ete-compare/ | Compare tree topologies You can estimate distances between gene and species trees of a different size and with duplicated events... |
huerta@embl.de | |
embl.de | <img> |
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